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Machine Learning-Driven Risk Ranking Framework for Virulence & Resistance Traits: An E. coli Case Study
General Data
Member of UL |
Veterinary Faculty |
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Status |
partner | |
Name of the leading partner |
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Project code/ Project No. |
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Project Title |
Machine Learning-Driven Risk Ranking Framework for Virulence & Resistance Traits: An E. coli Case Study | |
Financier |
Evropska agencija za varnost hrane (EFSA) | |
Project period |
29.04.2026–28.10.2027 | |
Yearly sum of FTE |
11.000,00 EUR |
|
Leader |
Bojan Papić | |
Scientific field |
Microbiology | |
Partners |
University of Ljubljana, Veterinary Faculty, Slovenia Technological University Dublin (TU Dublin), Ireland Polytechnic University of Cartagena (UPCT), Spain Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER), Italy |
Project Phases
Task 1. Literature review
Task 2. Development of semi-quantitative risk scoring system
Task 3. Development of a curated WGS dataset
Task 4. Validation of the predictive model
Task 5. User-friendly software application for risk ranking
Task 6. Assessing suitability of framework to enhance stakeholder collaboration
Project Description
"Machine Learning-Driven Risk Ranking Framework for Virulence & Resistance Traits: An E. coli Case Study" is an activity funded by the European Food Safety Authority (EFSA) through a Tailor-Made Activity (TMA) programme. Commenced in April 2026, the project will run for 18 months and brings together four partner institutions: Technological University Dublin as the lead coordinator and host institution of the principal investigator Dr Elena Alexa, Polytechnic University of Cartagena, University of Ljubljana and Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna. Using Escherichia coli as a case study, the project aims to develop an innovative methodology that integrates whole-genome sequencing (WGS) data, machine learning (ML) models, and multi-criteria decision analysis (MCDA) to enhance microbial risk assessment.
Structure of the Project Group
- Bojan Papić
- Minja Stevanović
The veterinarian on duty
Emergency veterinary assistance for dogs and cats and a telephone number of constant readiness.
Library
A wide selection of domestic and foreign professional literature in the field of veterinary medicine and other sciences.
Location
Gerbičeva 60
SI-1000 Ljubljana
Slovenija
Sample Reception
Samples are received at several locations throughout Slovenia. See where.
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